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Discussions Questions (4,3) Please help me Answer ALL to compare to my answers and Thank you with details & clarity!

12. Explain how Ptashne altered the structure of the mediator protein GAL11 to demonstrate that the one way that activators promote transcription is to anchor mediator to a gene. Repressors may also anchor mediator to a gene, however their effect is to decrease expression. How does the interaction of repressors and activators with mediator differ?

14. Explain how cohesion and CTCF stabilize looping of DNA.

15. While cohesion can interact with CTCF it can also interact with transcriptional activators. How might the interaction of cohesion with transcriptional activators promoter transcription.

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Jean Keeling
Jean KeelingLv2
28 Sep 2019
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Related questions

Discussions Questions (4,2) Please help me Answer ALL to compare to my answers and Thank you with details & clarity!

3. Most regulatory proteins (activators or repressors) form dimers before they can bind. What are the advantages of dimerization of these proteins? Why do heterodimers bind different DNA sequences than homodimers? How might dimerization be used to regulate gene expression?

4. Architectural like HMGรขย€ย™s can bind to DNA and cause the DNA to bend at a sharp angle. Some of these protein promote transcription even though they do not contact the RNA Polymerase, GTF or any other regulatory protein. What is a plausible explanation for how these DNA bending proteins influence gene expression?

13

Which of the two major categories of the chemical reactions in photosynthesis is oxygen the INDIRECT product?

A

Glycolysis

B

Oxidative phosphorylation

C

Both light and dark

D

Light independent phase (LIP)

E

Light dependent phase (LDP)

14

You have a stomach flu characterized by vomiting. Which of the following systems is most responsible for the food in your stomach going the wrong way, e.g. vomiting? (Disregard this question and answer choice B)

A

Cardiac Muscle in the large intestine as discussed in class.

B

Smooth muscle in the gastrointestinal tract

C

Smooth muscle in the blood vessels

D

Skeletal muscle in the intestine

15

Proteins are made from which of the following smaller sub units?

A

Nucleotides

B

Amino acids that cannot enter the blood stream and go to cells

C

Monosaccharides

D

Fatty acids

E

Amino acids which can form new protein

16

Carbohydrates are digested in the gastrointestinal system into which of the following substances that is the smallest structure?

A

Polysaccharides that are produced by glucagon

B

Monosaccharides that are produced by insulin

C

Monosaccharides

D

Polysaccharide

17

Which of the following biomolecules has the longest digestion time? In other words, how long does it take for the biomolecule to be catabolized?

A

DNA

B

Lipid

C

Carbohydrate

D

Protein

18

You are sunburned after a long day at the beach. Which one is not an example of UV damage to your skin cells?

A

A mutation can occur in your ovaries

B

A mutation can occur in skin cell DNA that can lead to errors in transcription.

C

Errors can occur during DNA replication.

D

UV light can cause mutations in DNA of skins cells.

E

Thymine bases in your skin DNA bond with each other instead of across the double helix

19

This region, the ______________ (a) tells RNA polymerase where to bind to DNA while this region, the ______________ (b) tells RNA where to start transcription.

A

(a) promoter, (b) open reading frame

B

(a) start codon, (b) methionine

C

(a) promoter, (b) start site

D

(a) start site, (b) promoter

20

The genetic code is used to translate ______________ into ______________.

A

lipids, nucleotides

B

nucleotides,carbohydrates

C

nucleotides, lipids

D

nucleotides, amino acids

E

nucleosides, amino acids

21

Transcription of a gene has just completed. What are the next steps (in the correct order) to complete expression of that gene?

A

RNA polymerase makes a copy of DNA into mRNA.

B

mRNA is translated in the nucleus and ribosomal RNA moves into the cytoplasm.

C

Gene expression is completed after transcription.

D

mRNA moves into the cytoplasm and with tRNA they interact to form protein

E

Translation machinery moves into the nucleus and mRNA is translated into protein.

22

How is it that a mutation in DNA stored inside the nucleus of a cell can cause a disease affecting multiple organs?

A

This remains an unanswered question in science that scientists are still trying to figure out.

B

The mutated DNA is expressed in multiple cells through the process of transcription and translation, and the altered protein causes the disease wherever the DNA was expressed.

C

The mutated DNA is expressed in one cell and the altered protein travels to multiple organs to cause disease.

D

The mutated DNA is expressed and the mRNA takes the mutated information to other cells where the altered protein is made to cause disease in that organ.

23

The advantage of sickle cell anemia is which of the following?

A

It decreases the amount of oxygen in the blood cells so that mosquitoes carrying malaria will live

B

It decreases the amount of oxygen in the blood cells so that mosquitoe's blood form will die.

C

It allows the blood vessels to decrease the amount of blood going to the toes and feet.

D

There is none.

24

Which of the following is a purpose of cell division?

A

Cell reproduction

B

Growth

C

Repair

D

All of these

*Please don't answer with photos, DO NOT UPLOAD PHOTO, it's hard to read.

I post this question twice, please don't answer this post if you already answer the other one, if you can answer different answer that's fine. REASON WHY I POST IT TWICE, I NEED TWO DIFFERENT VIEW.

Discussion

Hi All - this week you will learn about DNA - the molecule of life! You may think that protein-coding genes are the most important, but results from the Human Genome Project revealed that only about 2% of our DNA codes for protein - so what about the rest of the "junk DNA" (or non-protein coding portion of the genome) - is it functionally important? Yes! Scientists are learning how "the non-protein-coding portion of the genome is of crucial functional importance: for normal development and physiology and for disease". I would like you to please choose a topic with regards to the non-protein coding portion of the genome (this will introduce you to gene regulation which we will cover in chapter 11) or you may also choose to write about a topic that describes a mutation in any protein that is involved in DNA replication, transcription, or translation (we did not talk about all of the enzymes involved in those processes). Please list your reputable source - this is worth 0.5 pt (even if you use one of my sources below) and tell me WHY you chose your topic (this is worth 1 pt.) please try to briefly explain your topic to the best of your knowledge - I don't expect you to write a lot of detail about your topic - it might be hard to understand (which you are welcome to comment on in your paragraph)!

Examples to choose from (but not limited to) include: noncoding RNAs (snRNAs, miRNAs, siRNAs, snoRNAs, piRNAs, lincRNAs) and RNA therapeutics:

LIST:

1. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4119351/ (Development of microRNA therapeutics is coming of age)

2. http://www.umassmed.edu/rti/ (RNA Therapeutics Institute)

3. http://www.genengnews.com/insight-and-intelligence/rna-based-therapeutics-and-vaccines/77900520/

4. http://genesdev.cshlp.org/content/26/21/2361.full (Biology of PIWI-Interacting RNAs: new insights into biogenesis and function inside and outside of germlines)

5. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4265212/ (PIWI proteins and their interactors in piRNA biogenesis, germline development and gene expression)

6. http://www.news-medical.net/news/20121203/microRNAs-play-an-important-role-during-embryonic-development.aspx

7. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578617/ (the role of microRNAs in cell fate determination)

8. http://news.berkeley.edu/2017/01/13/scientists-reprogram-embryonic-stem-cells-to-expand-their-potential/

9. http://www.the-scientist.com/?articles.view/articleNo/40871/title/The-Second-Coming-of-RNAi/

10. http://web.mit.edu/newsoffice/2013/cardiac-development-needs-more-than-protein-coding-genes-0124.html (long non-coding RNA molecules)

11. http://www.alzforum.org/news/research-news/new-role-micrornas-torpedoes-sink-neurons(microRNAs)

12. http://ghr.nlm.nih.gov/condition/rothmund-thomson-syndrome (mutation in human helicase gene)

13. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633371/ (mutation in mitochondrial helicase gene called TWINKLE)

14. http://sfari.org/news-and-opinion/news/2013/in-autism-related-disorders-rna-turns-out-to-be-key (RNA topoisomerase)

15. http://ghr.nlm.nih.gov/gene/TERC (dyskeratosis congenita - mutations in the TERC gene - the RNA component of telomerase)

16. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3853347/ (Top3beta is an RNA topoisomerase that works with Fragile X syndrome protein to promote synapse formation)

The following 3 articles discuss long non-coding RNAs - there are many examples in each article so you only need to talk about one example - not the whole article:

1. http://www.sciencedirect.com/science/article/pii/S2468054016300063 (mechanism of action and functional utility)

2. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5084630/ (dysregulated expression in ovarian cancer)

3. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736767/ (stem cells)

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