BIO 198 Lecture Notes - Lecture 36: Dna-Binding Domain, Tata Box, Intron

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The promoter proximal element (adjacent to): start of transcription and tata sequence (sometimes) and this tata box about 30 bp from start of transcription. Dna is flexible and it bends and proteins bound proximal to promoter and then proteins bound at faraway enhancers and are brought into proximity of the promoter. Enhancers don"t actually bind the rna polymerase or transcription factors directly but change the structure of the nearby to allow better binding. Transcription factors specific that bind to the gene. Dna binding domain but bind to complex of transcription factors). Transcription factors activate: yeast have enhancers that are closer. You can still turn on genes with yeast activators in many different systems. Upstream activator sequences (binding sites next to the promoter). Gal46 bound all the time (dna footprinting experiment and show that it binds all the time). Gal80 and bind to gal4 and shield activation domain from performing its activity.

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