GEN-4500 Quiz: RP quiz 2 studyguide
Document Summary
Obtain high quality whole genome sequence of homozygous peach genome. Investigate path of peach domestication through genome. Identify how peach genome differs from other rosaceae members. Paired end reads from 2. 8 kb, 4. 4 kb, and 7. 8 kb. Bacterial plasmids (35. 3 kb to 69. 5 kb) clones. Plots for the eight pseudomolecules in the peach genome showing the: persica percentage of the genome (in nonoverlapping 500-kb windows) that consists of various annotated features, represented as stacked area graphs. The gray line shows 100 times the mean r2 value for all snps in 50-kb windows as an estimate of ld. The approximate position of each centromere is indicated with a vertical black bar. Below, three tracks of vertical lines show the positions of predicted mirnas (black), noncoding. Shd and sot found to be large gene families in apple and peach. C3h and hct & hqt gene families have both undergone significant expression due to tandem gene duplication events.
