BIOL 4087 : BIOCHEMISTRY TEST 2 NOTES

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15 Mar 2019
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Nucleoside = base + sugar: for purines sugar attaches to base at the number 9 spot (figure 8-4) Phosphodiester bond (dna)(rna) the 3" to 5" link between nucleotides in dna and rna. If sequence is not specified far most left side is 5" end. Watson-crick structure of dna: double stranded, strands are antiparallel and are complimentary, a=t both base pairs have 2 hydrogen bonds. G=c both base pairs have 3 hydrogen bonds: double helix bases are more hydrophobic therefore on inside and sugars and phosphate are on outside more hydrophilic. Major and minor grooves: bases are accessible to dna binding proteins. B form dna in solution (watson-crick) double stranded dna (dsdna) A form rna dna hybrids or double stranded rna (broader helix) Dna replication is present in each of the two daughter strands. Nick translation carried out by dna polymerase i 5" 3" exonuclease (figure 25-16: termination.

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