BIOL 130 Lecture Notes - Lecture 15: Exergonic Reaction, Non-Covalent Interactions, Activation Energy

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27 Oct 2016

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Enzymes: catalyze reactions, act to accelerate reactions that would spontaneously occur. Transition states and activation energy: enzyme curves are going to have the same shape, transition state higher state intermediate, reactants transition. Example: heat: negative energy exergonic reaction. All reactions require energy input to overcome barrier of activation energy. Enzymes lower the activation energy of a reaction: reactants and products have the same starting/ending points. Catalysis of reactions by enzymes: on graph. X- axis is progress of the reaction. Y- axis is free energy (increasing upward) Reaction with enzyme lower free energy level than free energy without. Enzymes and substrate specificity enzyme: enzymes act on a single substrate or several closely-related substrates, active site where substrate goes and connects to enzyme, substrate bonding noncovalent bonding hangs onto cell tighter. Induced fit when the enzyme tightens down on the substrate. Catalysis by enzymes: weak interactions hold the substrate in the active site.

Related Questions

Which of the following is FALSE with respect to coupledreactions?

	they occur in ALL cells (bacteria, plants, animals, etc.)
	enzymes are typically involved
	endergonic reactions power exergonic reactions
	the coupled reaction has a ?G value that is negative
	none of the above (i.e., all of the above are TRUE)

Which of the following reactions is LEAST likely to bespontaneous? One with a:

	very large increase in entropy and a very large decrease inenthalpy
	very large increase in entropy and a very small increase inenthalpy
	very small decrease in entropy and a very large decrease inenthalpy
	very small increase in entropy and a very small decrease inenthalpy
	very small decrease in entropy and a very small increase inenthalpy

Energy of activation refers to the:

A)	?G of a reaction
B)	difference in energy between the transition state and theproduct
C)	difference in energy between substrate and product
D)	net change in free energy
E)	energy input needed to reach the transition state

Homeostasis refers to maintaining a relatively constantenvironment, and is achieved to a large extent by how enzymes areregulated. For example, when the end product of a pathway regulatesan enzyme that acts early in the same pathway, the effect is mostoften:

	stimulation if an anabolic pathway, and inhibition if acatabolic pathway
	inhibition if an anabolic pathway, and stimulation if acatabolic pathway
	stimulation, whether an anabolic or catabolic pathway
	inhibition, whether an anabolic or catabolic pathway

Enzymes function by:

	decreasing the free energy level of the reactants
	decreasing the free energy level of the transition state
	increasing the free energy level of the reactants
	changing delta G from positive to negative
	changing delta G from negative to positive
	increasing the free energy level of the products
	decreasing the free energy level of the products

6.	When carbohydrates are oxidized, the C

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3) The hydrolysis of sucrose to glucose and fructose is exergonic. However, if you dissolve sucrose in water and keep the solution overnight at room temperature, there is no detectable conversion to glucose and fructose. Why?

Select one:

a. The change in free energy of the reaction is negative.

b. The activation energy of the reaction is high.

c. The free energy of the products is higher than the free energy of the reactants.

d. This is a condensation reaction.

e. The change in free energy of the reaction is positive.

5) Competitive inhibition differs from non-competitive inhibition in that the ___1___ site is where we see competitive inhibition, while the non-competitive inhibitor __2___.

1. a. allosteric b. non-active c. active d. hydrophillic e. hydrophobic

2.
a. binds to the active site, thus blocking it
b. binds outside the active site, changing the shape of the enzyme
c. binds outside the active site, and blocks the active site

6) Phosphofructokinase is an enzyme, and as such it __1___ of the reaction. It is part of glycolysis, and is an example of an enzyme controlled by inhibition, as high levels of citrate (an intermediate further down the catabolic pathway) turns the enzyme off
(1)Select one:
a. lowers activation energy
b. lowers the ÎG
c. raises the Free Energy
(2)Select one
a. non-competitivenegative feedback
b. irreversible competitivereversible competitive.

15)The reactions in the pathways of glycolysis and the citric acid cycle harvest the high-energy electrons stored in glucose. Therefore, these pathways _______________.

Select one:

a. take place in animal cells, but not in plant cells
b. are catabolic pathways
c. are anabolic pathways
d. involve the reduction of glucose and its metabolic intermediates

21) In an exergonic chemical reaction, the products have less free energy than the reactants (-ÎG). Endergonic reactions require an input of energy (+ÎG). The addition of starting materials and the removal of end products prevent metabolism from reaching final equilibrium. Instead, the cell exists in a state of dynamic equilibrium.

Select one:
True
False

greyferret515

1.When something appears blue, it is absorbing all colors except__________.

yellow

blue

red

green

orange

2.During heavy exercise, lactic acid can build up in ourmuscles. Why? How does this resemble the metabolism of bacteria andyeast?

lactic acid is results from insufficient oxygen during sugarmetabolism; it is fermentation

lactic acid accumulates when we are dehydrated; bacteria andyeast use the same pathway

lactic acid is built up from carbon dioxide; bacteria and yeaststore energy in this way

3.Why must a cell keep a similar concentration of dissolvedsubstances with the fluid surrounding them?

to avoid dilution of potential energy

to avoid osmotic imbalance and rapid gain or loss of water

to maintain the correct amount of dehydration and hydrolysis

4.What is entropy?

the amount of energy in a system

the amount of disorganization

the amount of organization

5.Burning a log is the reverse reaction found in photosynthesis.What products would be formed in burning a log?

carbon dioxide and water

glucose and oxygen

oxygen and carbon dioxide

oxygen and water

6.The main reason that cellular respiration needs to occur stepby step instead of a single, big reaction is

cells don't store enough oxygen

too much energy would be released for the cell to harness

cells don't have many mitochondria.

cells produce the enzymes needed for cellular respiration veryslowly

7.Enzymes are catalysts because they operate to:

raise activation energy

lower activation energy

supply activation energy

supply the reactants

8.When ATP powers a reaction it becomes ADP. The ADP

can reform ATP by an exergonic reaction

is a waste product for lysosomal breakdown

can reform ATP by an endergonic reaction

can reform ATP by an oxidation reaction

can reform ATP by an equilibrium reaction

9.The energy source that drives photosynthesis is

water

glucose

carbon dioxide

oxygen

sunlight

10. What is the process by which enzymes regulate their ownactivity?

osmosis

self-propulsion

feedback inhibition

11.Coupled reactions are reactions in which a

endergonic reaction drives a spontaneous reaction

exergonic reaction drives a spontaneous reaction

endergonic reaction drives an exergonic reaction

exergonic reaction drives an endergonic reaction

12.How is water used in photosynthesis?

as a substrate for ATP synthase

as an electron donor

to combine with ADP forming ATP

as an electron acceptor

13.Why are the âDark Reactionsâ of photosynthesis referred to asâDarkâ?

they do not require light

they can only occur at night

they generate excess sugar and the leaves turn brown

14.What is the difference between potential and kineticenergy?

potential is stored, kinetic is being used

potential is being used, kinetic is ready to be used

potential is negative, kinetic is positive

15.The products of cellular respiration are

carbon dioxide, water, and ATP

glucose, water, and ATP

glucose, carbon dioxide, and ATP

oxygen, ATP, and water

carbon dioxide, glucose, and water

16.All of the following are correct about energy except:

The biological world gets its energy from the sun.

Chemical bonds store potential energy.

A boulder perched on a hill has kinetic energy.

Energy is defined as the ability to do work.

All forms of energy can be converted to heat.

17.What is needed for the end product of glycolysis, pyruvate,to enter the citric acid cycle?

More glucose for energy

ATP

Oxygen

Carbon dioxide

18.The enzyme that forms a transmembrane channel in mitochondriaand phosphorylates ADP

a carrier protein

ATP synthase

acetyl CoA

19.Fermentation is most common in

plants

microorganisms

animals

20.During adsorption of sunlight by photosystems, H+ ions aregenerated. Where do they come from? What are they used for?

from the breakdown of sugar; they help form water

water; they help form sugar

from carbon dioxide; they help dissolve NaCl

21.Glycolysis

does not use oxygen

uses oxygen

uses carbon dioxide

22.Photosynthesis is

not dependent on chlorophyll

a process that produces glucose and oxygen

a process that produces water and carbon dioxide

23.Breakdown of glucose generates many ATP molecules, each ofwhich can be used independently. Why is ATP ideally suited to powerbiological reactions?

ATP has many hydrogen bonds

ATP has enough energy to power one biological reaction

ATP readily dissolves in water

24.Objects that are not actively moving but have the capacity todo so are said to possess:

kinetic energy

entropy

potential energy

living energy

25.The first stage of cellular respiration, called ___________,takes place in the cytoplasm of the cell and needs no oxygen.

photorespiration

citric acid cycle

glycolysis

oxidation

26.Diffusion

requires energy

utilizes proteins to move molecules across a membrane

moves molecules against a concentration gradient

does not require energy

cannot occur without a membrane present

27.What is the name of the molecule on which an enzymeworks?

substrate

monomer

polymer

28.ATP contains

phenylalanine

two phosphate groups

three nitrate groups

three phosphate groups

29.How does chlorophyll function in photosynthesis?

by absorbing carbon dioxide

by absorbing the sun's energy

by absorbing water

30.Objects that are moving are said to possess:

living energy

potential energy

entropy

kinetic energy

31.The respiration pathway that evolved first is probably

glycolysis

aerobic respiration

citric acid cycle

32.The energy source for the process of photosynthesis is

oxygen

sunlight

carbon dioxide

chlorophyll

glucose

33.Burning wood generates heat and light. What type of reactionis this?

exergonic

kinetic energy

endergonic

potential energy

equilibrium

34.What is meant by a âcoupled reactionâ in terms of energy?

many poymers are built simultaneously

energy released by one reactions powers another reaction

some reactions occur in the same organelle

35.The First Law of Thermodynamics states:

energy is constantly being created by entropy events

energy can be changed from one form to another, but cannot becreated or destroyed

energy can be used and then destroyed because of entropy'sactions on it

energy can be destroyed while it is producing entropy

36.How do we dispose of the carbon derived from the glucose thatis metabolized during respiration?

by breathing out

via our urine

it is broken down in lysosomes

37.Both plant and animal cells have mitochondria because theyboth

carry on respiration

carry on photosynthesis.

require water

38.What is Activation Energy?

the energy needed to initiate a reaction

the energy that transports water into cells

potential energy

39.If you put a plant in a chamber and shine a light on it

oxygen will decrease and carbon dioxide will increase

oxygen will increase and carbon dioxide will decrease

oxygen and carbon dioxide will increase

oxygen and carbon dioxide will decrease

40.What are the inputs and the output molecules for the overallphotosynthetic process?

input sugar and oxygen; output carbon dioxide and water

input oxygen and water; output sugar and carbon dioxide

input carbon dioxide and water;output sugar and oxygen

41.What kind of reaction is photosynthesis?

endergonic

kinetic energy

exergonic

potential energy

equilibrium

42.In the process of glycolysis, glucose is cleaved into a pairof three-carbon molecules called

lactate

pyruvate

acetyl CoA

ATP

alcohol

43.Entropy is

order

disorder

complexity

Both order and disorder are correct

Both complexity and disorder are correct

44.Glycolysis takes place in the _____________ and the citricacid cycle and electron transport chain take place in the___________.

cytoplasm; endoplasmic reticulum

mitochondria, chloroplast

mitochondria; cytoplasm

cytoplasm; mitochondria

45.The organelle that carries out photosynthesis in plants isthe

mitochondria

chloroplast

ribosome

chlorophylllysosome

46.The energy to power the Calvin cycle comes from

cellular respiration

oxygen

the light reactions of photosynthesis

47.Which of the following can be broken down into intermediateproducts that enter cellular respiration?

Proteins

Lipids

Carbohydrates

All of these.

48.When cellular product levels get too high, the responsibleenzyme is inhibited. This is an example of

promotion

denaturation

equilibrium

a coenzyme

feedback inhibition

49.How is respiration the opposite of photosynthesis?

respiration breaks sugar down to carbon dioxide; photosynthesisbuilds sugar from carbon dioxide

respiration builds sugar from carbon dioxide; photosynthesisbreaks sugar down to carbon dioxide

respiration requires energy input; photosynthesis gives offexcess energy

50.The molecule that absorbs sunlight for photosynthesis is

oxygen

carbon dioxide

chlorophyll

glucose

sunlight

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BIOL 130 Lecture Notes - Lecture 15: Exergonic Reaction, Non-Covalent Interactions, Activation Energy

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