BIOL 142 Lecture Notes - Lecture 25: Lac Repressor, Lac Operon, Repressor

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1."Which"of"the"following"statements"about"the"lac"operon"is"FALSE?"
When"lactose"binds"to"the"lac"repressor"protein,"the"lac"repressor"protein"can"
no"longer"bind"to"the"operator.
True
A.
When+lactose+binds+to+the+operator,+transcription+is+stimulated.+
False:"not"lactose"that"binds"the"operator,"the"repressor"binds"to"the"
operator"DNA"sequence
Lactose"sugar"is"an"inducer"that"binds"to"the"repressor,"causing"the"
repressor"to"be"removed"from"the"operator
B.
When"the"lac"repressor"protein"binds"to"the"operator,"transcription"is"inhibited."
True
C.
True:"lactose"binds"a"repressor
Repressor"undergoes"conformational"change"that"reduces"affinity"for"
operator"sequence"so"it"releases"from"operator
D.
The"lac"repressor"protein"has"binding"sites"for"both"DNA"and"lactose.
True:"system"whereby"genes"needed"to"break"down"lactose"are"under"
control"of"a"operator"and"a"promoter
The"operator"in"the"absence"of"lactose"is"bound"by"a"repressor"protein"
that"can"bind"DNA"(operator"region)
Repressor"is"removed"from"operator"when"lactose"binds"to"repressor
Has"both"lactose"and"DNA"binding"sites
E.
Recap:"Because"positive"and"negative"control"elements"are"superimposed,"the"lac"
operon"is"only"fully"activated"when"lactose"is"available"and"when"glucose"is"scarce.
How"transcription"behaves"in"response"to"different"environmental"conditions"
relating"to"sugars
When"glucose"is"high"and"lactose"is"low"allows"lac"repressor"to"bind"to"
operator"to"act"as"a"physical"roadblock"so"RNA"polymerase"doesn't"undergo"
transcription
Glucose"high"lactose"high"lactose"causes"repressor"to"be"removed"from"the"
operator"but"cAMP"levels"are"low,"so"we"lack"positive"control
When"cAMP"are"high"and"glucose"low,"CAP"binds"to"binding"site"and"
promotes"transcription
Because"positive"and"negative"control"elements"are"superimposed,"the"lac"operon"is"
only"fully"activated"when"lactose"is"available"and"when"glucose"is"scarce
High"levels"of"lac"operon"when"we"remove"the"repressor
CAP"and"repressor"promotes"removal"transcription
Lactose"is"the"inducer"of"transcription"by"turning"off"transcription"protein
Learning"objectives
Compare(and(contrast(the(lac(operon(and(the(trp(operon.1.
Models"1"and"2"are"negative"control"via"repressor"protein
Difference"is"how"other"substances"act"on"repressor
In"inducible+systems,"an"inducer"from"the"cell’s"environment"prevents"a"
repressor"from"blocking"transcription"(lac"operon)
Shuts"off"repressor"to"stimulate"transcription
In"repressible+systems,"a"corepressor"produced"by"the"cell"activates"a"repressor,"
enabling"it"to"block"transcription"(trp"operon)
End"product"of"pathway"is"efficient"in"quantity"level,"so"transcription"is"
not"needed"and"shuts"down
Co-repressor"bound"to"repressor"to"activate"it"and"shut"down"
transcription
In"the"absence"of"tryptophan,"RNA"polymerase"transcribes"the"trp"operon,"leading"to"
production"of"enzymes"that"synthesize"tryptophan."
If"synthesis"of"an"enzyme"can"be"turned"off,"it"is"said"to"be"repressible."
The"trp"operon"in"E."coli"is"repressible."
When"we"transcribe"operons,"we"make"a"long"mRNA"that"codes"for"the"various"
proteins"coded"from"the"operon"(only"in"prokaryotes)
Repressible"system"(no"tryptophan)"leads"to"making"the"enzymes"needed"to"
make"tryptophan
When"tryptophan"(an"e.g."of"a"corepressor)"is"present,"it"binds"to"a"repressor,"which"
becomes"active."
The"molecule"that"binds"and"activates"a"repressor"is"called"a"corepressor and"
may"be"the"end"product"of"the"operon"(as"in"the"case"of"tryptophan).
Once"levels"are"high,"tryptophan"acts"as"a"corepressor"
Tryptophan"levels"will"drop"and"stimulate"the"pathway"again
The"activated"repressor"binds"to"the"operator of"the"trp"operon,"blocking"
production"of"enzymes"for"tryptophan"synthesis.
2."Which"of"the"following"would"you"expect"to"find"in"an"inducible"system?"
A+repressor+protein,+which+is+bound+to+DNA+in+absence+of+any+other+factor.+
Lac"operon,"repressor"binds"to"the"operator"in"the"absence"of"lactose
A.
A"repressor"protein,"which"is"bound"to"DNA"in"the"presence"of"a"corepressor."B.
An"activator"protein,"which"is"bound"to"DNA"in"absence"of"any"other"factor."C.
An"activator"protein,"which"is"bound"to"DNA"only"in"the"absence"of"an"inhibitorD.
3."When"tryptophan"is"present"in"the"culture"medium,"transcription"of"tryptophan-
synthesizing"genes"in"E."coli"is"stopped"by"a"repressor"binding"to"the:"
trp"repressor"A.
trp"operon"B.
trp"promoter"C.
trp+operator+
Trp"operon"repressor"when"bound"to"co-repressor,"the"active"repressor"
will"bind"to"the"trp"operator
D.
trp"polymeraseE.
Prokaryotic*Gene*Regulation*III
Monday,"April"16,"2018
11:59"AM
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1."Which"of"the"following"statements"about"the"lac"operon"is"FALSE?"
When"lactose"binds"to"the"lac"repressor"protein,"the"lac"repressor"protein"can"
no"longer"bind"to"the"operator.
True
A.
When+lactose+binds+to+the+operator,+transcription+is+stimulated.+
False:"not"lactose"that"binds"the"operator,"the"repressor"binds"to"the"
operator"DNA"sequence
Lactose"sugar"is"an"inducer"that"binds"to"the"repressor,"causing"the"
repressor"to"be"removed"from"the"operator
B.
When"the"lac"repressor"protein"binds"to"the"operator,"transcription"is"inhibited."
True
C.
When"lactose"binds"to"the"lac"repressor"protein,"the"shape"of"the"lac"repressor"
protein"is"changed."
True:"lactose"binds"a"repressor
Repressor"undergoes"conformational"change"that"reduces"affinity"for"
operator"sequence"so"it"releases"from"operator
D.
The"lac"repressor"protein"has"binding"sites"for"both"DNA"and"lactose.
True:"system"whereby"genes"needed"to"break"down"lactose"are"under"
control"of"a"operator"and"a"promoter
The"operator"in"the"absence"of"lactose"is"bound"by"a"repressor"protein"
that"can"bind"DNA"(operator"region)
Repressor"is"removed"from"operator"when"lactose"binds"to"repressor
Has"both"lactose"and"DNA"binding"sites
E.
Recap:"Because"positive"and"negative"control"elements"are"superimposed,"the"lac"
operon"is"only"fully"activated"when"lactose"is"available"and"when"glucose"is"scarce.
How"transcription"behaves"in"response"to"different"environmental"conditions"
relating"to"sugars
When"glucose"is"high"and"lactose"is"low"allows"lac"repressor"to"bind"to"
operator"to"act"as"a"physical"roadblock"so"RNA"polymerase"doesn't"undergo"
transcription
Glucose"high"lactose"high"lactose"causes"repressor"to"be"removed"from"the"
operator"but"cAMP"levels"are"low,"so"we"lack"positive"control
When"cAMP"are"high"and"glucose"low,"CAP"binds"to"binding"site"and"
promotes"transcription
Because"positive"and"negative"control"elements"are"superimposed,"the"lac"operon"is"
only"fully"activated"when"lactose"is"available"and"when"glucose"is"scarce
High"levels"of"lac"operon"when"we"remove"the"repressor
CAP"and"repressor"promotes"removal"transcription
Lactose"is"the"inducer"of"transcription"by"turning"off"transcription"protein
Learning"objectives
Compare(and(contrast(the(lac(operon(and(the(trp(operon.
1.
Models"1"and"2"are"negative"control"via"repressor"protein
Difference"is"how"other"substances"act"on"repressor
In"inducible+systems,"an"inducer"from"the"cell’s"environment"prevents"a"
repressor"from"blocking"transcription"(lac"operon)
Shuts"off"repressor"to"stimulate"transcription
In"repressible+systems,"a"corepressor"produced"by"the"cell"activates"a"repressor,"
enabling"it"to"block"transcription"(trp"operon)
End"product"of"pathway"is"efficient"in"quantity"level,"so"transcription"is"
not"needed"and"shuts"down
Co-repressor"bound"to"repressor"to"activate"it"and"shut"down"
transcription
In"the"absence"of"tryptophan,"RNA"polymerase"transcribes"the"trp"operon,"leading"to"
production"of"enzymes"that"synthesize"tryptophan."
If"synthesis"of"an"enzyme"can"be"turned"off,"it"is"said"to"be"repressible."
The"trp"operon"in"E."coli"is"repressible."
When"we"transcribe"operons,"we"make"a"long"mRNA"that"codes"for"the"various"
proteins"coded"from"the"operon"(only"in"prokaryotes)
Repressible"system"(no"tryptophan)"leads"to"making"the"enzymes"needed"to"
make"tryptophan
When"tryptophan"(an"e.g."of"a"corepressor)"is"present,"it"binds"to"a"repressor,"which"
becomes"active."
The"molecule"that"binds"and"activates"a"repressor"is"called"a"corepressor and"
may"be"the"end"product"of"the"operon"(as"in"the"case"of"tryptophan).
Once"levels"are"high,"tryptophan"acts"as"a"corepressor"
Tryptophan"levels"will"drop"and"stimulate"the"pathway"again
The"activated"repressor"binds"to"the"operator of"the"trp"operon,"blocking"
production"of"enzymes"for"tryptophan"synthesis.
2."Which"of"the"following"would"you"expect"to"find"in"an"inducible"system?"
A+repressor+protein,+which+is+bound+to+DNA+in+absence+of+any+other+factor.+
Lac"operon,"repressor"binds"to"the"operator"in"the"absence"of"lactose
A.
A"repressor"protein,"which"is"bound"to"DNA"in"the"presence"of"a"corepressor."B.
An"activator"protein,"which"is"bound"to"DNA"in"absence"of"any"other"factor."C.
An"activator"protein,"which"is"bound"to"DNA"only"in"the"absence"of"an"inhibitorD.
3."When"tryptophan"is"present"in"the"culture"medium,"transcription"of"tryptophan-
synthesizing"genes"in"E."coli"is"stopped"by"a"repressor"binding"to"the:"
trp"repressor"A.
trp"operon"B.
trp"promoter"C.
trp+operator+
Trp"operon"repressor"when"bound"to"co-repressor,"the"active"repressor"
will"bind"to"the"trp"operator
D.
trp"polymeraseE.
Prokaryotic*Gene*Regulation*III
Monday,"April"16,"2018 11:59"AM
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Document Summary

When lactose binds to the lac repressor protein, the lac repressor protein can no longer bind to the operator. When lactose binds to the operator, transcription is stimulated. False: not lactose that binds the operator, the repressor binds to the operator dna sequence. Lactose sugar is an inducer that binds to the repressor, causing the repressor to be removed from the operator. When the lac repressor protein binds to the operator, transcription is inhibited. When lactose binds to the lac repressor protein, the shape of the lac repressor protein is changed. Repressor undergoes conformational change that reduces affinity for operator sequence so it releases from operator. The lac repressor protein has binding sites for both dna and lactose. True: system whereby genes needed to break down lactose are under control of a operator and a promoter. The operator in the absence of lactose is bound by a repressor protein that can bind dna (operator region)

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