Biochemistry 2280A Lecture Notes - Lecture 3: Alpha Helix, Protein Structure, Hydrogen Bond

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To find overall net charge, need to add up net charge of all ionisable groups at a given ph. Dipeptide: a peptide chain composed of 2 amino acids. Tripeptide: a peptide chain composed of 3 amino acids. Oliopeptide: a peptide chain composted of 3-10 amino acids. Polypeptide: a peptide chain composted of many amino acids: greater than 50 a. a. Protein: a molecule composted of one or more polypeptide: can have 1 or many more, all proteins are polypeptides but not all polypeptides are proteins, protein is a functional unit. Leaving only one single alpha carboxyl and one alpha amino group despite how long the polypeptide chain: only these two ionisable groups remain. Carboxyl terminus has carboxyl group & amino terminus has amino group: there is a certain polarity / direction to it. Grey = polypeptide back bone: all the atoms that weren"t the side chains, side chains project out of the peptide back bone.

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