Biochemistry 2280A Lecture Notes - Lecture 16: Cytochrome C Oxidase, Glycogen, Peptide

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tealcockroach503

12 Dec 2016

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Topic 13 continued: q: while studying a newly discovered species of bacterium, you purify an enzyme that catalyzes an irreversible step of the citric acid cycle. C) nadh is unlikely to have any effect on enzyme activity: since the step is irreversible usually regulated by something and nadh would be a good type of molecule to have an effect on this step. If you have lots of nadh around, you likely want to decrease enzyme activity to stop making more product: regulation of citric acid cycle. Competitive inhibition by products (e. g. pyruvate dehydrogenase reaction) A. it"s exhaled as part of co2. Oxygen atoms come from somewhere else, not from the inhaled oxygen. C. it is used to reduce nad+ to nadh. Oxygen is an oxidizing agent, not a reducing agent so it can"t reduce. E. both b and c: overview of electron transport.

Related Questions

1. Choose the TWO correct statements describing the citrate cycle.

	ATP is an indirect product of the citric acid cycle
	Acetyl CoA can increase the pool of citric acid cycle intermediates
	Fatty acids can increase the pool of citric acid cycle intermediates
	ADP inhibits Î±-ketoglutarate dehydrogenase
	The pool of mitochondrial oxaloacetate can be increased by pyruvate
	All enzymes of the citric acid cycle are found soluble and free in the mitochondrial matrix

2.Which molecule in the net reaction of the citrate cycle contributes to the inhibition of pyruvate dehydrogenase?

	NADH
	H⁺
	H₂O
	FAD

3. How would a high NADH to NAD⁺ ratio be expected to affect the pyruvate dehydrogenase reaction?

	The E1 subunit is phosphorylated by pyruvate dehydrogenase kinase, and the catalytic activity of pyruvate dehydrogenase decreases.
	The last step of the pyruvate dehydrogenase reaction is blocked, resulting in a decrease in activity.
	The pyruvate dehydrogenase phosphatase-1 enzyme would increase, resulting in pyruvate dehydrogenase activation at an accelerated rate.
	The pyruvate dehydrogenase kinase enzyme activity would increase, resulting in an increase in pyruvate dehydrogenase activity.

2. In many cases, cellular signal transduction is mediated by a membrane-associated G-protein complex. Which is not right about this protein complex?

A) The complex is made of Î±-, Î²-, and Î³-subunit.

B) The G_sÎ±-subunit has a GTPase activity.

C) Depending on the receptor types, either G_sÎ±-subunit or G_iÎ±-subunit is used.

D) Signal transduction through G-proteins ultimately regulates protein phosphorylation.

E) None of the above.

3. Which statement is not right about the pyruvate dehydrogenase?

A) This enzyme is located in the mitochondria.

B) This enzyme consists of three different enzymatic subunits (E1, E2, and E3).

C) This enzyme catalyzes the reaction: Pyruvate + CoA + NAD Â® Acetyl-CoA + CO₂ + NADH

D) This enzyme also uses TPP (thiamine pyrophosphate), lipoic acid, and FAD as cofactors.

E) Despite its complexity, this enzyme is not an important regulation point of TCA cycle.

4. To maintain a proper rate of the TCA cycle, oxaloacetate is replenished periodically. To increase [oxaloacetate], ___X____ is turned on but the TCA cycled is turned off by phosphorylation of __Y__.

A) X = Glyoxylate cycle :::::: Y = isocitrate dehydrogenase

B) X = Glyoxylate cycle :::::: Y = isocitrate lyase

C) X = Q cycle :::::: Y = isocitrate dehydrogenase

D) X = Q cycle :::::: Y = isocitrate lyase

E) None of the above.

5. Assume you have three NADH and one FADH₂. Calculate the total numbers of H⁺ pumped into the inter-membrane space and the maximal number of ATP produced inside the matrix.

A) 40 H⁺ and 12 ATP
B) 40 H⁺ and 11 ATP
C) 36 H⁺ and 12 ATP

D) 36 H⁺ and 11 ATP
E) None of the above.

1. Which is an w-3 fatty acid?

A) B) C) D) E) None ofthese

2. In many cases, cellular signal transduction is mediated by amembrane-associated G-protein complex. Which is not right aboutthis protein complex?

A) The complex is made of Î±-, Î²-, and Î³-subunit.

B) The G_sÎ±-subunit has a GTPase activity.

C) Depending on the receptor types, eitherG_sÎ±-subunit or G_iÎ±-subunit is used.

D) Signal transduction through G-proteins ultimately regulatesprotein phosphorylation.

E) None of the above.

3. Which statement is not right about the pyruvatedehydrogenase?

A) This enzyme is located in the mitochondria.

B) This enzyme consists of three different enzymatic subunits(E1, E2, and E3).

C) This enzyme catalyzes the reaction: Pyruvate + CoA + NAD Â®Acetyl-CoA + CO₂ + NADH

D) This enzyme also uses TPP (thiamine pyrophosphate), lipoicacid, and FAD as cofactors.

E) Despite its complexity, this enzyme is not an importantregulation point of TCA cycle.

4. To maintain a proper rate of the TCA cycle, oxaloacetate isreplenished periodically. To increase [oxaloacetate], ___X____ isturned on but the rest step of TCA cycled is turned off byphosphorylation of __Y__.

A) X = Glyoxylate cycle :::::: Y = isocitrate dehydrogenase

B) X = Glyoxylate cycle :::::: Y = isocitrate lyase

C) X = Qcycle :::::: Y = isocitrate dehydrogenase

D) X = Qcycle :::::: Y = isocitrate lyase

E) None of the above.

5. Assume you have three NADH and one FADH₂.Calculate the total numbers of H⁺ pumped into theinter-membrane space and the maximal number of ATP produced insidethe matrix.

A) 40 H⁺ and 12 ATP
B) 40 H⁺ and 11 ATP
C) 36 H⁺ and 12 ATP

D) 36 H⁺ and 11 ATP
E) None of the above.

I put the following

1. D

2. D

3. E.

4. idk

5. idk

Can someone help me out for 4 & 5 and reassure I got 1-3correct! Thanks

sangriarabbit412

Biochemistry 2280A Lecture Notes - Lecture 16: Cytochrome C Oxidase, Glycogen, Peptide

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