MCB 2050 Lecture Notes - Lecture 22: Sodium Dodecyl Sulfate, Western Blot, Interactome

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Sodium dodecyl sulfate polyacrylamide gel electrophoresis (sds page) Protein interactome (iv) techniques for protein analysis. Cells are lysed in buffer containing the detergent sodium dodeycl sulfate. Sds binds proteins imparting a net negative charge, migrates to anode. Polypeptides migrate through a porous polyacrylamide gel matrix in an electric field. Mobility is a linear function of the logarithms of their molecular mass. Used to separate all polypeptides in a complex mixture. Protein bands in gels visualized by coommassie blue staining. Immunoblotting detection of a specific protein by specific antibody. Transfer of separated proteins from page to solid support (membrane) Detection of a target protein by a specific antibody. * the membrane creates an antibody for the protein. *how to detect the antibody that was made through the sds-page method. Protein gel sandwiched beside a blotting membrane. Negatively charged proteins migrate out of gel towards +ve electrode and trapped by blotting membrane.

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